USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: Q16778 USC-OGP 2-DE database:  Q16778 Q16778 General information about the entry View entry in simple text format Entry name H2B2E_HUMAN Primary accession number Q16778 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2B type 2-E; AltName: Full=Histone H2B-GL105; AltName: Full=Histone H2B.q; Short=H2B/q;. Gene name Name=HIST2H2BE Synonyms=H2BFQ Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1331: pI=5.13; Mw=16684 Cross-references UniProtKB/Swiss-Prot Q16778; H2B2E_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2B2E_HUMAN Primary accession number Q16778 Secondary accession number(s) A3KMC7 A8K110 Q4KMY1 Q5QNX0 Q9UE88 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 168) Name and origin of the protein Description RecName: Full=Histone H2B type 2-E; AltName: Full=Histone H2B-GL105; AltName: Full=Histone H2B.q; Short=H2B/q; Gene name Name=HIST2H2BE Synonyms=H2BFQ Encoded on Name=HIST2H2BE; Synonyms=H2BFQ Keywords 3D-structure; Acetylation; Antibiotic; Antimicrobial; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Glycoprotein; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X57985; CAA41051.1; -; Genomic_DNA EMBL AY131979; AAN59961.1; -; Genomic_DNA EMBL CR541895; CAG46693.1; -; mRNA EMBL AK289725; BAF82414.1; -; mRNA EMBL AL591493; CAI12568.1; -; Genomic_DNA EMBL CH471121; EAW53605.1; -; Genomic_DNA EMBL BC005827; AAH05827.1; -; mRNA EMBL BC069193; AAH69193.1; -; mRNA EMBL BC096121; AAH96121.1; -; mRNA EMBL BC098112; AAH98112.1; -; mRNA EMBL BC098289; AAH98289.1; -; mRNA EMBL BC107084; AAI07085.1; -; mRNA EMBL BC107085; AAI07086.1; -; mRNA EMBL M60756; AAA63192.1; -; mRNA CCDS CCDS936.1; -; . PIR I37467; I37467; . PIR S65409; S65409; . RefSeq NP_003519.1; NM_003528.2; . UniGene Hs.2178; -; . PDB 4NFT; X-ray; 2.61 A; A/B/C/D=34-126 PDBsum 4NFT; -; . ProteinModelPortal Q16778; -; . SMR Q16778; -; . BioGrid 113945; 122; . DIP DIP-39324N; -; . IntAct Q16778; 16; . MINT MINT-1461208; -; . STRING 9606.ENSP00000358151; -; . iPTMnet Q16778; -; . PhosphoSitePlus Q16778; -; . SwissPalm Q16778; -; . BioMuta HIST2H2BE; -; . DMDM 7387736; -; . EPD Q16778; -; . MaxQB Q16778; -; . PaxDb Q16778; -; . PeptideAtlas Q16778; -; . PRIDE Q16778; -; . TopDownProteomics Q16778; -; . DNASU 8349; -; . Ensembl ENST00000369155; ENSP00000358151; ENSG00000184678; . GeneID 8349; -; . KEGG hsa:8349; -; . UCSC uc001etc.4; human; . CTD 8349; -; . GeneCards HIST2H2BE; -; . H-InvDB HIX0029389; -; . HGNC HGNC:4760; HIST2H2BE; . HPA HPA042205; -; . HPA HPA043013; -; . HPA HPA048671; -; . MIM 601831; gene; . neXtProt NX_Q16778; -; . OpenTargets ENSG00000184678; -; . PharmGKB PA29135; -; . eggNOG KOG1744; Eukaryota; . eggNOG ENOG4111NV5; LUCA; . GeneTree ENSGT00760000118976; -; . HOGENOM HOG000231213; -; . HOVERGEN HBG007774; -; . InParanoid Q16778; -; . KO K11252; -; . OMA NESENHF; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB Q16778; -; . TreeFam TF300212; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5693565; Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks; . Reactome R-HSA-5693571; Nonhomologous End-Joining (NHEJ); . Reactome R-HSA-5693607; Processing of DNA double-strand break ends; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-69473; G2/M DNA damage checkpoint; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . ChiTaRS HIST2H2BE; human; . GeneWiki HIST2H2BE; -; . GenomeRNAi 8349; -; . PRO PR:Q16778; -; . Proteomes UP000005640; Chromosome 1; . Bgee ENSG00000184678; -; . CleanEx HS_HIST2H2BE; -; . Genevisible Q16778; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005615; C:extracellular space; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0000786; C:nucleosome; NAS:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; NAS:UniProtKB; . GO GO:0019731; P:antibacterial humoral response; IDA:UniProtKB; . GO GO:0050830; P:defense response to Gram-positive bacterium; IDA:UniProtKB; . GO GO:0002227; P:innate immune response in mucosa; IDA:UniProtKB; . GO GO:0006334; P:nucleosome assembly; NAS:UniProtKB; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR000558; Histone_H2B; . PANTHER PTHR23428; PTHR23428; 1; . Pfam PF00125; Histone; 1; . PRINTS PR00621; HISTONEH2B; . SMART SM00427; H2B; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00357; HISTONE_H2B; 1; .

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